WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G11.2.1 Sequence Name  R11G11.2.1
Length (nt)  1316   Chromosome Location  V: 532259-534070
Chromosome . Primary Identifier  V Chromosome Location . Start  532259
Chromosome Location . End  534070 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003648 nhr-58 R11G11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G11.2 R11G11.2 1182   V: 532363-532460

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G11.2.1 532259 534070 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon170240   202   V: 532259-532460 Caenorhabditis elegans
Exon170241   63   V: 532507-532569 Caenorhabditis elegans
Exon170242   59   V: 532618-532676 Caenorhabditis elegans
Exon170243   275   V: 532974-533248 Caenorhabditis elegans
Exon170244   311   V: 533304-533614 Caenorhabditis elegans
Exon170245   406   V: 533665-534070 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G11.2.1 532259 534070 1

1 Sequence

Length
1316

1 Sequence Ontology Term

Identifier Name Description
transcript