WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C6.2e.1 Sequence Name  K09C6.2e.1
Length (nt)  1905   Chromosome Location  V: 859239-862059
Chromosome . Primary Identifier  V Chromosome Location . Start  859239
Chromosome Location . End  862059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C6.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019556 K09C6.2 K09C6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C6.2e K09C6.2e 1905   V: 859239-859301

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C6.2e.1 859239 862059 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171132   63   V: 859239-859301 Caenorhabditis elegans
Exon171133   129   V: 859372-859500 Caenorhabditis elegans
Exon171138   95   V: 859552-859646 Caenorhabditis elegans
Exon171143   69   V: 859694-859762 Caenorhabditis elegans
Exon171148   162   V: 859807-859968 Caenorhabditis elegans
Exon171153   115   V: 860305-860419 Caenorhabditis elegans
Exon171158   91   V: 860465-860555 Caenorhabditis elegans
Exon171163   99   V: 860603-860701 Caenorhabditis elegans
Exon171168   539   V: 860750-861288 Caenorhabditis elegans
Exon171173   328   V: 861470-861797 Caenorhabditis elegans
Exon171178   215   V: 861845-862059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C6.2e.1 859239 862059 1

1 Sequence

Length
1905

1 Sequence Ontology Term

Identifier Name Description
transcript