WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y50D4C.3a Sequence Name  Y50D4C.3a
Length (nt)  1818   Chromosome Location  V: 939643-939836
Chromosome . Primary Identifier  V Chromosome Location . Start  939643
Chromosome Location . End  939836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50D4C.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26547 Y50D4C.3, isoform a 66.4 605 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057079
WBRNAi00020829
WBRNAi00066604

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y50D4C.3a 939643 939836 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021748 Y50D4C.3 Y50D4C.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y50D4C.3a 939643 939836 -1
CDS:Y50D4C.3a 940625 941140 -1
CDS:Y50D4C.3a 942397 942456 -1
CDS:Y50D4C.3a 942515 943030 -1
CDS:Y50D4C.3a 944713 945244 -1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y50D4C.3a.1 Y50D4C.3a.1 2070   V: 939391-945244