WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C3.1.1 Sequence Name  C38C3.1.1
Length (nt)  999   Chromosome Location  V: 1506295-1508096
Chromosome . Primary Identifier  V Chromosome Location . Start  1506295
Chromosome Location . End  1508096 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005691 sru-28 C38C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C3.1 C38C3.1 999   V: 1506295-1506537

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C3.1.1 1506295 1508096 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172232   243   V: 1506295-1506537 Caenorhabditis elegans
Exon172233   210   V: 1506578-1506787 Caenorhabditis elegans
Exon172234   159   V: 1507453-1507611 Caenorhabditis elegans
Exon172235   210   V: 1507660-1507869 Caenorhabditis elegans
Exon172236   177   V: 1507920-1508096 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C3.1.1 1506295 1508096 1

1 Sequence

Length
999

1 Sequence Ontology Term

Identifier Name Description
transcript