WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C38C3.9 Sequence Name  C38C3.9
Length (nt)  1197   Chromosome Location  V: 1510024-1510280
Chromosome . Primary Identifier  V Chromosome Location . Start  1510024
Chromosome Location . End  1510280
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C3.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08646 NHR-260 45.5 398 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042145
WBRNAi00011747
WBRNAi00029656

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C38C3.9 1510024 1510280 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016517 nhr-260 C38C3.9 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C38C3.9 1510024 1510280 -1
CDS:C38C3.9 1510339 1510451 -1
CDS:C38C3.9 1510510 1510817 -1
CDS:C38C3.9 1510875 1510990 -1
CDS:C38C3.9 1511038 1511178 -1
CDS:C38C3.9 1511369 1511630 -1

1 Sequence

Length
1197

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C38C3.9.1 C38C3.9.1 1349   V: 1509879-1511637