WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B4.1b.1 Sequence Name  F16B4.1b.1
Length (nt)  966   Chromosome Location  V: 1610712-1612676
Chromosome . Primary Identifier  V Chromosome Location . Start  1610712
Chromosome Location . End  1612676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017503 nhr-177 F16B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B4.1b F16B4.1b 966   V: 1610712-1610724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.1b.1 1610712 1612676 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172396   13   V: 1610712-1610724 Caenorhabditis elegans
Exon172398   65   V: 1610774-1610838 Caenorhabditis elegans
Exon172400   426   V: 1611525-1611950 Caenorhabditis elegans
Exon172402   95   V: 1612007-1612101 Caenorhabditis elegans
Exon172404   116   V: 1612144-1612259 Caenorhabditis elegans
Exon172405   251   V: 1612426-1612676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.1b.1 1610712 1612676 1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
transcript