WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16B4.12b Sequence Name  F16B4.12b
Length (nt)  1434   Chromosome Location  V: 1619452-1619702
Chromosome . Primary Identifier  V Chromosome Location . Start  1619452
Chromosome Location . End  1619702
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.12b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30756 NHR-117, isoform b 55.5 477 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044786
WBRNAi00044787
WBRNAi00031028

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16B4.12b 1619452 1619702 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003707 nhr-117 F16B4.12 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16B4.12b 1619452 1619702 -1
CDS:F16B4.12b 1619744 1619859 -1
CDS:F16B4.12b 1619908 1620002 -1
CDS:F16B4.12b 1620054 1620485 -1
CDS:F16B4.12b 1620568 1620693 -1
CDS:F16B4.12b 1621009 1621106 -1
CDS:F16B4.12b 1621153 1621292 -1
CDS:F16B4.12b 1621342 1621517 -1

1 Sequence

Length
1434

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16B4.12b.1 F16B4.12b.1 1472   V: 1619417-1621520