WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B1.3.1 Sequence Name  T08B1.3.1
Length (nt)  1383   Chromosome Location  V: 1996105-1999581
Chromosome . Primary Identifier  V Chromosome Location . Start  1996105
Chromosome Location . End  1999581 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B1.3 T08B1.3 1314   V: 1996171-1996286

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.3.1 1996105 1999581 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173391   182   V: 1996105-1996286 Caenorhabditis elegans
Exon173392   323   V: 1996336-1996658 Caenorhabditis elegans
Exon173393   98   V: 1996711-1996808 Caenorhabditis elegans
Exon173394   133   V: 1998635-1998767 Caenorhabditis elegans
Exon173395   485   V: 1998826-1999310 Caenorhabditis elegans
Exon173396   162   V: 1999420-1999581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.3.1 1996105 1999581 -1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
transcript