WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B10A.1a.1 Sequence Name  Y40B10A.1a.1
Length (nt)  562   Chromosome Location  V: 2068449-2069140
Chromosome . Primary Identifier  V Chromosome Location . Start  2068449
Chromosome Location . End  2069140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B10A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021486 lbp-9 Y40B10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B10A.1a Y40B10A.1a 459   V: 2068449-2068487

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.1a.1 2068449 2069140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173554   39   V: 2068449-2068487 Caenorhabditis elegans
Exon173555   252   V: 2068564-2068815 Caenorhabditis elegans
Exon173557   271   V: 2068870-2069140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.1a.1 2068449 2069140 1

1 Sequence

Length
562

1 Sequence Ontology Term

Identifier Name Description
transcript