WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y5H2B.2a Sequence Name  Y5H2B.2a
Length (nt)  1245   Chromosome Location  V: 2192501-2192584
Chromosome . Primary Identifier  V Chromosome Location . Start  2192501
Chromosome Location . End  2192584
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y5H2B.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26221 NHR-13, isoform a 47.5 414 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057796
WBRNAi00021190
WBRNAi00021194
WBRNAi00037649

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y5H2B.2a 2192501 2192584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003612 nhr-13 Y5H2B.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y5H2B.2a 2192501 2192584 1
CDS:Y5H2B.2a 2192716 2192869 1
CDS:Y5H2B.2a 2193090 2193244 1
CDS:Y5H2B.2a 2193295 2193456 1
CDS:Y5H2B.2a 2193500 2193631 1
CDS:Y5H2B.2a 2193683 2193747 1
CDS:Y5H2B.2a 2193794 2194038 1
CDS:Y5H2B.2a 2196171 2196319 1
CDS:Y5H2B.2a 2196667 2196765 1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y5H2B.2a.1 Y5H2B.2a.1 1310   V: 2192497-2196826