WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41B5.9.1 Sequence Name  F41B5.9.1
Length (nt)  1314   Chromosome Location  V: 2257420-2259927
Chromosome . Primary Identifier  V Chromosome Location . Start  2257420
Chromosome Location . End  2259927 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41B5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018265 nhr-182 F41B5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41B5.9 F41B5.9 1209   V: 2257475-2257838

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41B5.9.1 2257420 2259927 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174099   419   V: 2257420-2257838 Caenorhabditis elegans
Exon174101   613   V: 2258059-2258671 Caenorhabditis elegans
Exon174103   140   V: 2259512-2259651 Caenorhabditis elegans
Exon174105   104   V: 2259707-2259810 Caenorhabditis elegans
Exon174107   38   V: 2259890-2259927 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41B5.9.1 2257420 2259927 -1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
transcript