Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T27B7.9 | T27B7.9 |
668
 |
V: 2296998-2298686 |
Other
54 Allele
| Public Name |
|---|
| gk963301 |
| WBVar01585323 |
| WBVar01585324 |
| WBVar01585325 |
| WBVar01585326 |
| gk963591 |
| gk963553 |
| gk964259 |
| gk963850 |
| gk963027 |
| gk963604 |
| WBVar02121241 |
| WBVar02124610 |
| WBVar02124813 |
| WBVar02122641 |
| WBVar02123414 |
| WBVar02121459 |
| WBVar02123478 |
| gk624806 |
| gk658825 |
| gk567032 |
| WBVar01834559 |
| gk830353 |
| gk873146 |
| gk872621 |
| gk788052 |
| gk636374 |
| gk334691 |
| gk507491 |
| gk729086 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00268202 | 2296998 | 2298686 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_2296978..2296997 | 20 | V: 2296978-2296997 | Caenorhabditis elegans |
5 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in rrf-3(pk1426) comparing to in N2 at embryo stage. | DESeq2v 1.18.1, fold change > 1.5, adjusted p-value < 0.01. | WBPaper00056169:rrf-3(pk1426)_upregulated_embryo | |
| Transcripts that showed significantly increased expression in sin-3(tm1276) comparing to in N2. | DESeq2, fold change > 2, p-value < 0.01. | WBPaper00061203:sin-3(tm1276)_upregulated | |
| Transcripts that showed significantly decreased expression in sin-3(tm1276) comparing to in N2 at early embryo when there were only 3 -5 eggs in the adult. | DESeq2, fold change > 2, adjusted p-value < 0.01 | WBPaper00058598:sin-3(tm1276)_downregulated | |
| Transcripts that showed significantly increased expression in spr-1(ok2144) comparing to in N2. | DESeq2, fold change > 2, p-value < 0.01. | WBPaper00061203:spr-1(ok2144)_upregulated | |
| Transcripts that showed significantly decreased expression after 24 hours of induction of human beta Amyloid at young adult stage | A 2-fold change in expression level and a false discovery rate analog of p < 0.05. | WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA |