WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53E10.2g.1 Sequence Name  F53E10.2g.1
Length (nt)  1551   Chromosome Location  V: 2608652-2615262
Chromosome . Primary Identifier  V Chromosome Location . Start  2608652
Chromosome Location . End  2615262 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53E10.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000056 acr-17 F53E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53E10.2g F53E10.2g 1464   V: 2608674-2608724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.2g.1 2608652 2615262 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174935   73   V: 2608652-2608724 Caenorhabditis elegans
Exon174940   68   V: 2608777-2608844 Caenorhabditis elegans
Exon174945   228   V: 2609525-2609752 Caenorhabditis elegans
Exon174949   78   V: 2609869-2609946 Caenorhabditis elegans
Exon174953   162   V: 2609989-2610150 Caenorhabditis elegans
Exon174957   296   V: 2611189-2611484 Caenorhabditis elegans
Exon174961   143   V: 2611801-2611943 Caenorhabditis elegans
Exon174965   135   V: 2612829-2612963 Caenorhabditis elegans
Exon174974   176   V: 2613981-2614156 Caenorhabditis elegans
Exon174987   192   V: 2615071-2615262 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.2g.1 2608652 2615262 1

1 Sequence

Length
1551

1 Sequence Ontology Term

Identifier Name Description
transcript