WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53E10.2b.1 Sequence Name  F53E10.2b.1
Length (nt)  1623   Chromosome Location  V: 2608653-2615251
Chromosome . Primary Identifier  V Chromosome Location . Start  2608653
Chromosome Location . End  2615251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53E10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000056 acr-17 F53E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53E10.2b F53E10.2b 1548   V: 2608674-2608724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.2b.1 2608653 2615251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174936   72   V: 2608653-2608724 Caenorhabditis elegans
Exon174939   68   V: 2608777-2608844 Caenorhabditis elegans
Exon174944   228   V: 2609525-2609752 Caenorhabditis elegans
Exon174948   78   V: 2609869-2609946 Caenorhabditis elegans
Exon174952   162   V: 2609989-2610150 Caenorhabditis elegans
Exon174956   296   V: 2611189-2611484 Caenorhabditis elegans
Exon174960   143   V: 2611801-2611943 Caenorhabditis elegans
Exon174964   135   V: 2612829-2612963 Caenorhabditis elegans
Exon174970   84   V: 2613482-2613565 Caenorhabditis elegans
Exon174973   176   V: 2613981-2614156 Caenorhabditis elegans
Exon174986   181   V: 2615071-2615251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53E10.2b.1 2608653 2615251 1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
transcript