WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05D8.2a Sequence Name  R05D8.2a
Length (nt)  1002   Chromosome Location  V: 2774342-2774530
Chromosome . Primary Identifier  V Chromosome Location . Start  2774342
Chromosome Location . End  2774530
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46144 SRJ-18, isoform a 37.8 333 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051301
WBRNAi00034610

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05D8.2a 2774342 2774530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005606 srj-18 R05D8.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05D8.2a 2774342 2774530 1
CDS:R05D8.2a 2774576 2774635 1
CDS:R05D8.2a 2774918 2775229 1
CDS:R05D8.2a 2775270 2775371 1
CDS:R05D8.2a 2775424 2775593 1
CDS:R05D8.2a 2776090 2776258 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05D8.2a.1 R05D8.2a.1 1002   V: 2774342-2776258