WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54E2.3a Sequence Name  F54E2.3a
Length (nt)  12753   Chromosome Location  V: 2782578-2782585
Chromosome . Primary Identifier  V Chromosome Location . Start  2782578
Chromosome Location . End  2782585
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E2.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49211 KETN-1, isoform a 471.7 4250 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00048339
WBRNAi00015631
WBRNAi00015632
WBRNAi00017435
WBRNAi00017446
WBRNAi00017447
WBRNAi00017448
WBRNAi00017449
WBRNAi00017450
WBRNAi00017451
WBRNAi00026030
WBRNAi00026031
WBRNAi00026032
WBRNAi00026033
WBRNAi00025633
WBRNAi00026028
WBRNAi00026029
WBRNAi00027365
WBRNAi00027427
WBRNAi00027428
WBRNAi00027429
WBRNAi00027430
WBRNAi00079869

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54E2.3a 2782578 2782585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54E2.3a 2782578 2782585 -1
CDS:F54E2.3a 2782844 2782970 -1
CDS:F54E2.3a 2783023 2783252 -1
CDS:F54E2.3a 2783366 2784113 -1
CDS:F54E2.3a 2784160 2784342 -1
CDS:F54E2.3a 2784836 2784958 -1
CDS:F54E2.3a 2785054 2792622 -1
CDS:F54E2.3a 2792670 2792873 -1
CDS:F54E2.3a 2792920 2793114 -1
CDS:F54E2.3a 2793907 2794011 -1
CDS:F54E2.3a 2794054 2794163 -1
CDS:F54E2.3a 2795251 2795497 -1
CDS:F54E2.3a 2795546 2795703 -1
CDS:F54E2.3a 2795751 2796093 -1
CDS:F54E2.3a 2797018 2798009 -1
CDS:F54E2.3a 2798058 2798830 -1
CDS:F54E2.3a 2798883 2799042 -1
CDS:F54E2.3a 2799099 2799537 -1
CDS:F54E2.3a 2800182 2800220 -1

1 Sequence

Length
12753

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54E2.3a.1 F54E2.3a.1 13388   V: 2781943-2800220