WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D3.12.1 Sequence Name  T03D3.12.1
Length (nt)  993   Chromosome Location  V: 2846250-2848340
Chromosome . Primary Identifier  V Chromosome Location . Start  2846250
Chromosome Location . End  2848340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D3.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005628 srj-49 T03D3.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D3.12 T03D3.12 993   V: 2846250-2846412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.12.1 2846250 2848340 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175646   163   V: 2846250-2846412 Caenorhabditis elegans
Exon175647   170   V: 2846462-2846631 Caenorhabditis elegans
Exon175648   102   V: 2846676-2846777 Caenorhabditis elegans
Exon175649   369   V: 2846824-2847192 Caenorhabditis elegans
Exon175650   189   V: 2848152-2848340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D3.12.1 2846250 2848340 -1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
transcript