WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C3.5.1 Sequence Name  C44C3.5.1
Length (nt)  1137   Chromosome Location  V: 2978760-2980078
Chromosome . Primary Identifier  V Chromosome Location . Start  2978760
Chromosome Location . End  2980078 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005865 srw-118 C44C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C3.5 C44C3.5 1137   V: 2978760-2978846

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.5.1 2978760 2980078 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon175916   87   V: 2978760-2978846 Caenorhabditis elegans
Exon175917   142   V: 2978889-2979030 Caenorhabditis elegans
Exon175918   224   V: 2979080-2979303 Caenorhabditis elegans
Exon175919   589   V: 2979351-2979939 Caenorhabditis elegans
Exon175920   95   V: 2979984-2980078 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C3.5.1 2978760 2980078 -1

1 Sequence

Length
1137

1 Sequence Ontology Term

Identifier Name Description
transcript