WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39H10A.7a Sequence Name  Y39H10A.7a
Length (nt)  1512   Chromosome Location  V: 3757318-3757734
Chromosome . Primary Identifier  V Chromosome Location . Start  3757318
Chromosome Location . End  3757734
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10A.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26076 CHK-1, isoform a 56.9 503 Caenorhabditis elegans
 

Other

53 RNAi

WormBase ID
WBRNAi00009316
WBRNAi00067189
WBRNAi00067270
WBRNAi00067536
WBRNAi00067690
WBRNAi00067835
WBRNAi00067853
WBRNAi00067908
WBRNAi00068006
WBRNAi00068045
WBRNAi00068097
WBRNAi00068165
WBRNAi00056297
WBRNAi00068331
WBRNAi00068333
WBRNAi00068332
WBRNAi00068335
WBRNAi00068334
WBRNAi00068835
WBRNAi00062864
WBRNAi00020429
WBRNAi00063321
WBRNAi00063322
WBRNAi00062863
WBRNAi00106238
WBRNAi00106239
WBRNAi00098035
WBRNAi00036960
WBRNAi00076784
WBRNAi00026680

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39H10A.7a 3757318 3757734 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39H10A.7a 3757318 3757734 -1
CDS:Y39H10A.7a 3757939 3758101 -1
CDS:Y39H10A.7a 3758270 3758503 -1
CDS:Y39H10A.7a 3758701 3758914 -1
CDS:Y39H10A.7a 3758980 3759463 -1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39H10A.7a.1 Y39H10A.7a.1 1683   V: 3757153-3759469