WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08F11.5.1 Sequence Name  R08F11.5.1
Length (nt)  1146   Chromosome Location  V: 3806261-3807752
Chromosome . Primary Identifier  V Chromosome Location . Start  3806261
Chromosome Location . End  3807752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08F11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005754 srw-7 R08F11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08F11.5 R08F11.5 1146   V: 3806261-3806874

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.5.1 3806261 3807752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177831   614   V: 3806261-3806874 Caenorhabditis elegans
Exon177832   189   V: 3806978-3807166 Caenorhabditis elegans
Exon177833   117   V: 3807336-3807452 Caenorhabditis elegans
Exon177834   226   V: 3807527-3807752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.5.1 3806261 3807752 1

1 Sequence

Length
1146

1 Sequence Ontology Term

Identifier Name Description
transcript