WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49G7.5.1 Sequence Name  C49G7.5.1
Length (nt)  1163   Chromosome Location  V: 4042181-4043601
Chromosome . Primary Identifier  V Chromosome Location . Start  4042181
Chromosome Location . End  4043601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49G7.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016783 irg-2 C49G7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49G7.5 C49G7.5 837   V: 4042404-4042426

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49G7.5.1 4042181 4043601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178345   246   V: 4042181-4042426 Caenorhabditis elegans
Exon178346   329   V: 4042593-4042921 Caenorhabditis elegans
Exon178347   439   V: 4042968-4043406 Caenorhabditis elegans
Exon178348   149   V: 4043453-4043601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49G7.5.1 4042181 4043601 1

1 Sequence

Length
1163

1 Sequence Ontology Term

Identifier Name Description
transcript