WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.7.1 Sequence Name  T05B4.7.1
Length (nt)  1047   Chromosome Location  V: 4110634-4112616
Chromosome . Primary Identifier  V Chromosome Location . Start  4110634
Chromosome Location . End  4112616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005881 srw-134 T05B4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.7 T05B4.7 1047   V: 4110634-4110638

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.7.1 4110634 4112616 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178455   5   V: 4110634-4110638 Caenorhabditis elegans
Exon178456   128   V: 4110685-4110812 Caenorhabditis elegans
Exon178457   224   V: 4110862-4111085 Caenorhabditis elegans
Exon178458   598   V: 4111882-4112479 Caenorhabditis elegans
Exon178459   92   V: 4112525-4112616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.7.1 4110634 4112616 -1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
transcript