WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R02D1.1a Sequence Name  R02D1.1a
Length (nt)  1200   Chromosome Location  V: 4322200-4322247
Chromosome . Primary Identifier  V Chromosome Location . Start  4322200
Chromosome Location . End  4322247
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D1.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30823 NHR-125, isoform a 46.5 399 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051121
WBRNAi00034525

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R02D1.1a 4322200 4322247 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003715 nhr-125 R02D1.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R02D1.1a 4322200 4322247 -1
CDS:R02D1.1a 4322655 4322687 -1
CDS:R02D1.1a 4322735 4322773 -1
CDS:R02D1.1a 4323186 4323453 -1
CDS:R02D1.1a 4324106 4324296 -1
CDS:R02D1.1a 4324348 4324739 -1
CDS:R02D1.1a 4325174 4325289 -1
CDS:R02D1.1a 4325336 4325448 -1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R02D1.1a.1 R02D1.1a.1 1346   V: 4322121-4325515