WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39G3.5a.1 Sequence Name  F39G3.5a.1
Length (nt)  963   Chromosome Location  V: 4722614-4724621
Chromosome . Primary Identifier  V Chromosome Location . Start  4722614
Chromosome Location . End  4724621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39G3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018210 F39G3.5 F39G3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39G3.5a F39G3.5a 756   V: 4722620-4723000

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.5a.1 4722614 4724621 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179615   387   V: 4722614-4723000 Caenorhabditis elegans
Exon179618   66   V: 4723048-4723113 Caenorhabditis elegans
Exon179623   158   V: 4724028-4724185 Caenorhabditis elegans
Exon179625   352   V: 4724270-4724621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.5a.1 4722614 4724621 1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
transcript