WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.9c.1 Sequence Name  C37H5.9c.1
Length (nt)  1803   Chromosome Location  V: 4836027-4840013
Chromosome . Primary Identifier  V Chromosome Location . Start  4836027
Chromosome Location . End  4840013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003528 nas-9 C37H5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.9c C37H5.9c 1419   V: 4836037-4836408

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.9c.1 4836027 4840013 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179829   382   V: 4836027-4836408 Caenorhabditis elegans
Exon179832   87   V: 4837456-4837542 Caenorhabditis elegans
Exon179836   70   V: 4837726-4837795 Caenorhabditis elegans
Exon179840   130   V: 4837841-4837970 Caenorhabditis elegans
Exon179844   226   V: 4838027-4838252 Caenorhabditis elegans
Exon179848   126   V: 4838300-4838425 Caenorhabditis elegans
Exon179852   187   V: 4838587-4838773 Caenorhabditis elegans
Exon179856   182   V: 4839324-4839505 Caenorhabditis elegans
Exon179861   413   V: 4839601-4840013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.9c.1 4836027 4840013 -1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript