WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D12.3a.1 Sequence Name  K11D12.3a.1
Length (nt)  1311   Chromosome Location  V: 5019224-5022363
Chromosome . Primary Identifier  V Chromosome Location . Start  5019224
Chromosome Location . End  5022363 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005655 srr-4 K11D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D12.3a K11D12.3a 1212   V: 5019249-5019300

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.3a.1 5019224 5022363 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180232   77   V: 5019224-5019300 Caenorhabditis elegans
Exon180234   49   V: 5020610-5020658 Caenorhabditis elegans
Exon180236   78   V: 5020715-5020792 Caenorhabditis elegans
Exon180238   351   V: 5021052-5021402 Caenorhabditis elegans
Exon180240   172   V: 5021557-5021728 Caenorhabditis elegans
Exon180243   584   V: 5021780-5022363 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.3a.1 5019224 5022363 1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
transcript