WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F3.4.1 Sequence Name  F08F3.4.1
Length (nt)  1294   Chromosome Location  V: 5410955-5413001
Chromosome . Primary Identifier  V Chromosome Location . Start  5410955
Chromosome Location . End  5413001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017262 F08F3.4 F08F3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F3.4 F08F3.4 1077   V: 5411114-5411357

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.4.1 5410955 5413001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180995   403   V: 5410955-5411357 Caenorhabditis elegans
Exon180996   178   V: 5411416-5411593 Caenorhabditis elegans
Exon180997   233   V: 5411643-5411875 Caenorhabditis elegans
Exon180998   270   V: 5412440-5412709 Caenorhabditis elegans
Exon180999   210   V: 5412792-5413001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.4.1 5410955 5413001 1

1 Sequence

Length
1294

1 Sequence Ontology Term

Identifier Name Description
transcript