WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7a.1 Sequence Name  C18C4.7a.1
Length (nt)  4378   Chromosome Location  V: 5550317-5567219
Chromosome . Primary Identifier  V Chromosome Location . Start  5550317
Chromosome Location . End  5567219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7a C18C4.7a 4047   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7a.1 5550317 5567219 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181355   379   V: 5550317-5550695 Caenorhabditis elegans
Exon181361   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181372   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181379   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181389   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181399   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181409   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181419   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181429   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181439   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181449   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181459   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181469   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181479   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181489   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181519   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181526   144   V: 5564472-5564615 Caenorhabditis elegans
Exon181534   57   V: 5564667-5564723 Caenorhabditis elegans
Exon181538   60   V: 5565559-5565618 Caenorhabditis elegans
Exon181542   113   V: 5566298-5566410 Caenorhabditis elegans
Exon181544   219   V: 5566745-5566963 Caenorhabditis elegans
Exon181545   109   V: 5567014-5567122 Caenorhabditis elegans
Exon181548   55   V: 5567165-5567219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7a.1 5550317 5567219 -1

1 Sequence

Length
4378

1 Sequence Ontology Term

Identifier Name Description
transcript