WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18C4.7e Sequence Name  C18C4.7e
Length (nt)  3069   Chromosome Location  V: 5550641-5550695
Chromosome . Primary Identifier  V Chromosome Location . Start  5550641
Chromosome Location . End  5550695
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30729 C18C4.7, isoform e 118.4 1022 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040915
WBRNAi00010991
WBRNAi00029061

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18C4.7e 5550641 5550695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18C4.7e 5550641 5550695 -1
CDS:C18C4.7e 5550743 5550880 -1
CDS:C18C4.7e 5551773 5551889 -1
CDS:C18C4.7e 5551941 5552074 -1
CDS:C18C4.7e 5552138 5552925 -1
CDS:C18C4.7e 5552982 5553099 -1
CDS:C18C4.7e 5553148 5553610 -1
CDS:C18C4.7e 5553926 5554278 -1
CDS:C18C4.7e 5554353 5554478 -1
CDS:C18C4.7e 5554526 5554766 -1
CDS:C18C4.7e 5554903 5555153 -1
CDS:C18C4.7e 5555687 5555857 -1
CDS:C18C4.7e 5555906 5556019 -1

1 Sequence

Length
3069

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18C4.7e.3 C18C4.7e.3 3876   V: 5550313-5557707
Transcript:C18C4.7e.2 C18C4.7e.2 3698   V: 5550314-5564617
Transcript:C18C4.7e.1 C18C4.7e.1 3815   V: 5550314-5565620