WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14C11.5.1 Sequence Name  C14C11.5.1
Length (nt)  1065   Chromosome Location  V: 5644471-5646311
Chromosome . Primary Identifier  V Chromosome Location . Start  5644471
Chromosome Location . End  5646311 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14C11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006008 srx-117 C14C11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14C11.5 C14C11.5 969   V: 5644487-5644564

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.5.1 5644471 5646311 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181717   94   V: 5644471-5644564 Caenorhabditis elegans
Exon181718   161   V: 5644894-5645054 Caenorhabditis elegans
Exon181719   74   V: 5645102-5645175 Caenorhabditis elegans
Exon181720   95   V: 5645225-5645319 Caenorhabditis elegans
Exon181721   58   V: 5645371-5645428 Caenorhabditis elegans
Exon181722   164   V: 5645493-5645656 Caenorhabditis elegans
Exon181723   194   V: 5645849-5646042 Caenorhabditis elegans
Exon181724   225   V: 5646087-5646311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.5.1 5644471 5646311 1

1 Sequence

Length
1065

1 Sequence Ontology Term

Identifier Name Description
transcript