WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04E6.5.1 Sequence Name  C04E6.5.1
Length (nt)  1634   Chromosome Location  V: 5902133-5904843
Chromosome . Primary Identifier  V Chromosome Location . Start  5902133
Chromosome Location . End  5904843 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04E6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015422 C04E6.5 C04E6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04E6.5 C04E6.5 1548   V: 5902248-5902310

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04E6.5.1 5902133 5904843 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182225   38   V: 5902133-5902170 Caenorhabditis elegans
Exon182226   99   V: 5902212-5902310 Caenorhabditis elegans
Exon182227   135   V: 5902381-5902515 Caenorhabditis elegans
Exon182228   92   V: 5903000-5903091 Caenorhabditis elegans
Exon182229   147   V: 5903141-5903287 Caenorhabditis elegans
Exon182230   253   V: 5903334-5903586 Caenorhabditis elegans
Exon182231   278   V: 5903634-5903911 Caenorhabditis elegans
Exon182232   126   V: 5904160-5904285 Caenorhabditis elegans
Exon182233   244   V: 5904332-5904575 Caenorhabditis elegans
Exon182234   222   V: 5904622-5904843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04E6.5.1 5902133 5904843 1

1 Sequence

Length
1634

1 Sequence Ontology Term

Identifier Name Description
transcript