WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F12F3.1a Sequence Name  F12F3.1a
Length (nt)  1410   Chromosome Location  V: 6141761-6141988
Chromosome . Primary Identifier  V Chromosome Location . Start  6141761
Chromosome Location . End  6141988
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12F3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09359 EXP-2, isoform a 53.1 469 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00089832
WBRNAi00044446
WBRNAi00013165
WBRNAi00089883
WBRNAi00090043
WBRNAi00090201

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F12F3.1a 6141761 6141988 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001374 exp-2 F12F3.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F12F3.1a 6141761 6141988 1
CDS:F12F3.1a 6142049 6142162 1
CDS:F12F3.1a 6142213 6142332 1
CDS:F12F3.1a 6142378 6142551 1
CDS:F12F3.1a 6142600 6143191 1
CDS:F12F3.1a 6143239 6143420 1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
CDS  

8 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F12F3.1a.2 F12F3.1a.2 2173   V: 6131400-6143970
Transcript:F12F3.1a.3 F12F3.1a.3 2424   V: 6135266-6143970
Transcript:F12F3.1a.4 F12F3.1a.4 2127   V: 6137996-6143970
Transcript:F12F3.1a.5 F12F3.1a.5 4307   V: 6139414-6143970
Transcript:F12F3.1a.6 F12F3.1a.6 2136   V: 6139836-6143970
Transcript:F12F3.1a.7 F12F3.1a.7 2266   V: 6140803-6143970
Transcript:F12F3.1a.8 F12F3.1a.8 2221   V: 6140872-6143970
Transcript:F12F3.1a.1 F12F3.1a.1 1602   V: 6141471-6143536