WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12B6.1.1 Sequence Name  K12B6.1.1
Length (nt)  3076   Chromosome Location  V: 6303771-6308337
Chromosome . Primary Identifier  V Chromosome Location . Start  6303771
Chromosome Location . End  6308337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12B6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019666 sago-1 K12B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12B6.1 K12B6.1 2646   V: 6303799-6303958

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12B6.1.1 6303771 6308337 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183773   188   V: 6303771-6303958 Caenorhabditis elegans
Exon183774   254   V: 6304010-6304263 Caenorhabditis elegans
Exon183775   203   V: 6304409-6304611 Caenorhabditis elegans
Exon183776   173   V: 6304662-6304834 Caenorhabditis elegans
Exon183777   126   V: 6304887-6305012 Caenorhabditis elegans
Exon183778   311   V: 6305358-6305668 Caenorhabditis elegans
Exon183779   287   V: 6305715-6306001 Caenorhabditis elegans
Exon183780   94   V: 6306055-6306148 Caenorhabditis elegans
Exon183781   189   V: 6306292-6306480 Caenorhabditis elegans
Exon183782   111   V: 6306531-6306641 Caenorhabditis elegans
Exon183783   90   V: 6306687-6306776 Caenorhabditis elegans
Exon183784   252   V: 6306821-6307072 Caenorhabditis elegans
Exon183785   177   V: 6307413-6307589 Caenorhabditis elegans
Exon183786   122   V: 6307640-6307761 Caenorhabditis elegans
Exon183787   499   V: 6307839-6308337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12B6.1.1 6303771 6308337 1

1 Sequence

Length
3076

1 Sequence Ontology Term

Identifier Name Description
transcript