WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H4.3.1 Sequence Name  T05H4.3.1
Length (nt)  3453   Chromosome Location  V: 6442337-6447556
Chromosome . Primary Identifier  V Chromosome Location . Start  6442337
Chromosome Location . End  6447556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020266 T05H4.3 T05H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H4.3 T05H4.3 3453   V: 6442337-6442459

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05H4.3.1 6442337 6447556 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184102   123   V: 6442337-6442459 Caenorhabditis elegans
Exon184103   327   V: 6442535-6442861 Caenorhabditis elegans
Exon184104   64   V: 6443073-6443136 Caenorhabditis elegans
Exon184105   492   V: 6443179-6443670 Caenorhabditis elegans
Exon184106   167   V: 6444158-6444324 Caenorhabditis elegans
Exon184107   705   V: 6444369-6445073 Caenorhabditis elegans
Exon184108   117   V: 6445257-6445373 Caenorhabditis elegans
Exon184109   144   V: 6445425-6445568 Caenorhabditis elegans
Exon184110   132   V: 6445619-6445750 Caenorhabditis elegans
Exon184111   117   V: 6445795-6445911 Caenorhabditis elegans
Exon184112   77   V: 6445964-6446040 Caenorhabditis elegans
Exon184113   87   V: 6446086-6446172 Caenorhabditis elegans
Exon184114   273   V: 6446408-6446680 Caenorhabditis elegans
Exon184115   186   V: 6446724-6446909 Caenorhabditis elegans
Exon184116   228   V: 6446990-6447217 Caenorhabditis elegans
Exon184117   192   V: 6447275-6447466 Caenorhabditis elegans
Exon184118   22   V: 6447535-6447556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05H4.3.1 6442337 6447556 1

1 Sequence

Length
3453

1 Sequence Ontology Term

Identifier Name Description
transcript