WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:EGAP9.3.1 Sequence Name  EGAP9.3.1
Length (nt)  1174   Chromosome Location  V: 6578185-6580122
Chromosome . Primary Identifier  V Chromosome Location . Start  6578185
Chromosome Location . End  6580122 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
EGAP9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017151 EGAP9.3 EGAP9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:EGAP9.3 EGAP9.3 1065   V: 6578225-6578314

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:EGAP9.3.1 6578185 6580122 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184473   130   V: 6578185-6578314 Caenorhabditis elegans
Exon184474   92   V: 6578492-6578583 Caenorhabditis elegans
Exon184475   168   V: 6578729-6578896 Caenorhabditis elegans
Exon184476   104   V: 6578942-6579045 Caenorhabditis elegans
Exon184477   116   V: 6579096-6579211 Caenorhabditis elegans
Exon184478   114   V: 6579262-6579375 Caenorhabditis elegans
Exon184479   161   V: 6579420-6579580 Caenorhabditis elegans
Exon184480   67   V: 6579732-6579798 Caenorhabditis elegans
Exon184481   89   V: 6579846-6579934 Caenorhabditis elegans
Exon184482   133   V: 6579990-6580122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:EGAP9.3.1 6578185 6580122 -1

1 Sequence

Length
1174

1 Sequence Ontology Term

Identifier Name Description
transcript