WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC404.3a Sequence Name  ZC404.3a
Length (nt)  1569   Chromosome Location  V: 6785491-6785595
Chromosome . Primary Identifier  V Chromosome Location . Start  6785491
Chromosome Location . End  6785595
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC404.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07594 SPE-39, isoform a 59.5 522 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00058887
WBRNAi00021675

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC404.3a 6785491 6785595 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004975 spe-39 ZC404.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC404.3a 6785491 6785595 1
CDS:ZC404.3a 6785761 6785921 1
CDS:ZC404.3a 6785968 6786175 1
CDS:ZC404.3a 6786227 6786388 1
CDS:ZC404.3a 6786439 6786575 1
CDS:ZC404.3a 6786631 6786946 1
CDS:ZC404.3a 6786999 6787161 1
CDS:ZC404.3a 6787212 6787315 1
CDS:ZC404.3a 6787368 6787580 1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC404.3a.1 ZC404.3a.1 1808   V: 6785457-6787785