WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4j.1 Sequence Name  T07H8.4j.1
Length (nt)  768   Chromosome Location  V: 6956638-6957968
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6957968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4j T07H8.4j 768   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4j.1 6956638 6957968 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186146   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186160   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186165   226   V: 6957173-6957398 Caenorhabditis elegans
Exon186180   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186190   200   V: 6957769-6957968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4j.1 6956638 6957968 1

1 Sequence

Length
768

1 Sequence Ontology Term

Identifier Name Description
transcript