WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.1.1 Sequence Name  T07H8.1.1
Length (nt)  861   Chromosome Location  V: 6976347-6977387
Chromosome . Primary Identifier  V Chromosome Location . Start  6976347
Chromosome Location . End  6977387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005907 srx-16 T07H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.1 T07H8.1 861   V: 6976347-6976385

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.1.1 6976347 6977387 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186424   39   V: 6976347-6976385 Caenorhabditis elegans
Exon186425   161   V: 6976433-6976593 Caenorhabditis elegans
Exon186426   594   V: 6976679-6977272 Caenorhabditis elegans
Exon186427   67   V: 6977321-6977387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.1.1 6976347 6977387 1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
transcript