WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y97E10AR.5.1 Sequence Name  Y97E10AR.5.1
Length (nt)  647   Chromosome Location  V: 8011213-8012345
Chromosome . Primary Identifier  V Chromosome Location . Start  8011213
Chromosome Location . End  8012345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y97E10AR.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022400 rpb-9 Y97E10AR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y97E10AR.5 Y97E10AR.5 504   V: 8011356-8011545

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10AR.5.1 8011213 8012345 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon188974   333   V: 8011213-8011545 Caenorhabditis elegans
Exon188975   129   V: 8011598-8011726 Caenorhabditis elegans
Exon188976   185   V: 8012161-8012345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y97E10AR.5.1 8011213 8012345 -1

1 Sequence

Length
647

1 Sequence Ontology Term

Identifier Name Description
transcript