WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.7a.1 Sequence Name  F25G6.7a.1
Length (nt)  1868   Chromosome Location  V: 8539727-8543259
Chromosome . Primary Identifier  V Chromosome Location . Start  8539727
Chromosome Location . End  8543259 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017798 slc-17.8 F25G6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.7a F25G6.7a 1584   V: 8539970-8540086

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.7a.1 8539727 8543259 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190193   360   V: 8539727-8540086 Caenorhabditis elegans
Exon190195   845   V: 8540158-8541002 Caenorhabditis elegans
Exon190197   425   V: 8541059-8541483 Caenorhabditis elegans
Exon190199   136   V: 8541539-8541674 Caenorhabditis elegans
Exon190203   102   V: 8543158-8543259 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.7a.1 8539727 8543259 -1

1 Sequence

Length
1868

1 Sequence Ontology Term

Identifier Name Description
transcript