WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.4.1 Sequence Name  F25G6.4.1
Length (nt)  1501   Chromosome Location  V: 8552695-8555383
Chromosome . Primary Identifier  V Chromosome Location . Start  8552695
Chromosome Location . End  8555383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.4 F25G6.4 1440   V: 8552720-8552902

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.4.1 8552695 8555383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190225   208   V: 8552695-8552902 Caenorhabditis elegans
Exon190226   155   V: 8553075-8553229 Caenorhabditis elegans
Exon190227   151   V: 8553290-8553440 Caenorhabditis elegans
Exon190228   191   V: 8553492-8553682 Caenorhabditis elegans
Exon190229   103   V: 8553735-8553837 Caenorhabditis elegans
Exon190230   198   V: 8554207-8554404 Caenorhabditis elegans
Exon190231   294   V: 8554447-8554740 Caenorhabditis elegans
Exon190233   201   V: 8555183-8555383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.4.1 8552695 8555383 1

1 Sequence

Length
1501

1 Sequence Ontology Term

Identifier Name Description
transcript