WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25G6.9.1 Sequence Name  F25G6.9.1
Length (nt)  4301   Chromosome Location  V: 8565275-8570000
Chromosome . Primary Identifier  V Chromosome Location . Start  8565275
Chromosome Location . End  8570000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25G6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017800 F25G6.9 F25G6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25G6.9 F25G6.9 4122   V: 8565409-8565521

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.9.1 8565275 8570000 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190249   247   V: 8565275-8565521 Caenorhabditis elegans
Exon190250   79   V: 8565573-8565651 Caenorhabditis elegans
Exon190251   2524   V: 8565707-8568230 Caenorhabditis elegans
Exon190252   212   V: 8568308-8568519 Caenorhabditis elegans
Exon190253   605   V: 8568572-8569176 Caenorhabditis elegans
Exon190254   245   V: 8569226-8569470 Caenorhabditis elegans
Exon190255   112   V: 8569518-8569629 Caenorhabditis elegans
Exon190256   154   V: 8569672-8569825 Caenorhabditis elegans
Exon190257   123   V: 8569878-8570000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25G6.9.1 8565275 8570000 -1

1 Sequence

Length
4301

1 Sequence Ontology Term

Identifier Name Description
transcript