WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F41E6.4b Sequence Name  F41E6.4b
Length (nt)  2550   Chromosome Location  V: 8611122-8611136
Chromosome . Primary Identifier  V Chromosome Location . Start  8611122
Chromosome Location . End  8611136
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41240 SMK-1, isoform b 96.2 849 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00008777
WBRNAi00025464
WBRNAi00095333
WBRNAi00095315
WBRNAi00095349
WBRNAi00046994
WBRNAi00095313
WBRNAi00095357
WBRNAi00095336
WBRNAi00095316
WBRNAi00095318
WBRNAi00095331
WBRNAi00095330
WBRNAi00095322
WBRNAi00085853
WBRNAi00095328
WBRNAi00095326
WBRNAi00095302
WBRNAi00095306
WBRNAi00095308
WBRNAi00095309
WBRNAi00095311
WBRNAi00095351
WBRNAi00095338
WBRNAi00095320
WBRNAi00075851
WBRNAi00095324

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F41E6.4b 8611122 8611136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018285 smk-1 F41E6.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F41E6.4b 8611122 8611136 1
CDS:F41E6.4b 8611382 8611686 1
CDS:F41E6.4b 8612179 8612752 1
CDS:F41E6.4b 8612799 8613059 1
CDS:F41E6.4b 8613105 8614013 1
CDS:F41E6.4b 8614063 8614203 1
CDS:F41E6.4b 8614735 8615079 1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F41E6.4b.2 F41E6.4b.2 3543   V: 8610888-8615838
Transcript:F41E6.4b.1 F41E6.4b.1 2648   V: 8611024-8615079