WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41E6.13b.1 Sequence Name  F41E6.13b.1
Length (nt)  1752   Chromosome Location  V: 8629224-8631327
Chromosome . Primary Identifier  V Chromosome Location . Start  8629224
Chromosome Location . End  8631327 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E6.13b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018294 atg-18 F41E6.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E6.13b F41E6.13b 1185   V: 8629789-8629799

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.13b.1 8629224 8631327 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190469   576   V: 8629224-8629799 Caenorhabditis elegans
Exon190471   188   V: 8629843-8630030 Caenorhabditis elegans
Exon190473   168   V: 8630082-8630249 Caenorhabditis elegans
Exon190475   479   V: 8630328-8630806 Caenorhabditis elegans
Exon190477   173   V: 8630890-8631062 Caenorhabditis elegans
Exon190479   98   V: 8631110-8631207 Caenorhabditis elegans
Exon190481   70   V: 8631258-8631327 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E6.13b.1 8629224 8631327 -1

1 Sequence

Length
1752

1 Sequence Ontology Term

Identifier Name Description
transcript