WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC190.1.1 Sequence Name  ZC190.1.1
Length (nt)  1374   Chromosome Location  V: 8683052-8686160
Chromosome . Primary Identifier  V Chromosome Location . Start  8683052
Chromosome Location . End  8686160 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC190.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000541 cln-3.3 ZC190.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC190.1 ZC190.1 1254   V: 8683068-8683117

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC190.1.1 8683052 8686160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190586   66   V: 8683052-8683117 Caenorhabditis elegans
Exon190587   112   V: 8683473-8683584 Caenorhabditis elegans
Exon190588   119   V: 8684044-8684162 Caenorhabditis elegans
Exon190589   159   V: 8684214-8684372 Caenorhabditis elegans
Exon190590   153   V: 8685012-8685164 Caenorhabditis elegans
Exon190591   157   V: 8685215-8685371 Caenorhabditis elegans
Exon190592   234   V: 8685421-8685654 Caenorhabditis elegans
Exon190593   141   V: 8685705-8685845 Caenorhabditis elegans
Exon190594   233   V: 8685928-8686160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC190.1.1 8683052 8686160 1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
transcript