WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC196.7.1 Sequence Name  ZC196.7.1
Length (nt)  2869   Chromosome Location  V: 8716495-8720516
Chromosome . Primary Identifier  V Chromosome Location . Start  8716495
Chromosome Location . End  8720516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC196.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001616 glr-5 ZC196.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC196.7 ZC196.7 2799   V: 8716539-8716620

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.7.1 8716495 8720516 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190617   126   V: 8716495-8716620 Caenorhabditis elegans
Exon190618   150   V: 8716853-8717002 Caenorhabditis elegans
Exon190619   92   V: 8717056-8717147 Caenorhabditis elegans
Exon190620   160   V: 8717192-8717351 Caenorhabditis elegans
Exon190621   725   V: 8717538-8718262 Caenorhabditis elegans
Exon190622   523   V: 8718542-8719064 Caenorhabditis elegans
Exon190623   114   V: 8719110-8719223 Caenorhabditis elegans
Exon190624   129   V: 8719293-8719421 Caenorhabditis elegans
Exon190625   393   V: 8719465-8719857 Caenorhabditis elegans
Exon190627   94   V: 8719931-8720024 Caenorhabditis elegans
Exon190628   229   V: 8720102-8720330 Caenorhabditis elegans
Exon190629   134   V: 8720383-8720516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC196.7.1 8716495 8720516 1

1 Sequence

Length
2869

1 Sequence Ontology Term

Identifier Name Description
transcript