WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B7.1c.1 Sequence Name  C01B7.1c.1
Length (nt)  3315   Chromosome Location  V: 8786545-8792776
Chromosome . Primary Identifier  V Chromosome Location . Start  8786545
Chromosome Location . End  8792776 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B7.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006342 sup-37 C01B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B7.1c C01B7.1c 2823   V: 8786848-8786968

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.1c.1 8786545 8792776 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon190835   72   V: 8786545-8786616 Caenorhabditis elegans
Exon190842   129   V: 8786840-8786968 Caenorhabditis elegans
Exon190848   867   V: 8787189-8788055 Caenorhabditis elegans
Exon190855   479   V: 8788200-8788678 Caenorhabditis elegans
Exon190860   108   V: 8789462-8789569 Caenorhabditis elegans
Exon190867   79   V: 8789841-8789919 Caenorhabditis elegans
Exon190871   80   V: 8790928-8791007 Caenorhabditis elegans
Exon190878   947   V: 8791165-8792111 Caenorhabditis elegans
Exon190884   554   V: 8792223-8792776 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B7.1c.1 8786545 8792776 1

1 Sequence

Length
3315

1 Sequence Ontology Term

Identifier Name Description
transcript