WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06C4.8.1 Sequence Name  K06C4.8.1
Length (nt)  1248   Chromosome Location  V: 8907196-8909444
Chromosome . Primary Identifier  V Chromosome Location . Start  8907196
Chromosome Location . End  8909444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06C4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019444 frpr-11 K06C4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06C4.8 K06C4.8 1113   V: 8907280-8907318

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06C4.8.1 8907196 8909444 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191024   123   V: 8907196-8907318 Caenorhabditis elegans
Exon191025   165   V: 8907623-8907787 Caenorhabditis elegans
Exon191026   92   V: 8907928-8908019 Caenorhabditis elegans
Exon191027   261   V: 8908067-8908327 Caenorhabditis elegans
Exon191028   319   V: 8908747-8909065 Caenorhabditis elegans
Exon191029   131   V: 8909109-8909239 Caenorhabditis elegans
Exon191030   157   V: 8909288-8909444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06C4.8.1 8907196 8909444 1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
transcript