WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19A5.4.1 Sequence Name  T19A5.4.1
Length (nt)  1375   Chromosome Location  V: 8961878-8964105
Chromosome . Primary Identifier  V Chromosome Location . Start  8961878
Chromosome Location . End  8964105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19A5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003634 nhr-44 T19A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.4 T19A5.4 1287   V: 8961960-8962061

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.4.1 8961878 8964105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191246   184   V: 8961878-8962061 Caenorhabditis elegans
Exon191247   271   V: 8962118-8962388 Caenorhabditis elegans
Exon191248   95   V: 8962435-8962529 Caenorhabditis elegans
Exon191249   96   V: 8962722-8962817 Caenorhabditis elegans
Exon191250   219   V: 8962866-8963084 Caenorhabditis elegans
Exon191251   132   V: 8963359-8963490 Caenorhabditis elegans
Exon191252   89   V: 8963581-8963669 Caenorhabditis elegans
Exon191253   59   V: 8963722-8963780 Caenorhabditis elegans
Exon191254   78   V: 8963827-8963904 Caenorhabditis elegans
Exon191255   152   V: 8963954-8964105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19A5.4.1 8961878 8964105 -1

1 Sequence

Length
1375

1 Sequence Ontology Term

Identifier Name Description
transcript