WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0222.9.1 Sequence Name  B0222.9.1
Length (nt)  3829   Chromosome Location  V: 9168393-9173005
Chromosome . Primary Identifier  V Chromosome Location . Start  9168393
Chromosome Location . End  9173005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0222.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015057 gad-3 B0222.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0222.9 B0222.9 3774   V: 9168444-9168972

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0222.9.1 9168393 9173005 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon191795   580   V: 9168393-9168972 Caenorhabditis elegans
Exon191796   233   V: 9169028-9169260 Caenorhabditis elegans
Exon191797   622   V: 9169307-9169928 Caenorhabditis elegans
Exon191798   170   V: 9169994-9170163 Caenorhabditis elegans
Exon191799   91   V: 9170209-9170299 Caenorhabditis elegans
Exon191800   305   V: 9170346-9170650 Caenorhabditis elegans
Exon191801   197   V: 9170694-9170890 Caenorhabditis elegans
Exon191802   100   V: 9170935-9171034 Caenorhabditis elegans
Exon191803   312   V: 9171079-9171390 Caenorhabditis elegans
Exon191804   201   V: 9171440-9171640 Caenorhabditis elegans
Exon191805   101   V: 9171692-9171792 Caenorhabditis elegans
Exon191806   123   V: 9171838-9171960 Caenorhabditis elegans
Exon191808   136   V: 9172007-9172142 Caenorhabditis elegans
Exon191809   320   V: 9172187-9172506 Caenorhabditis elegans
Exon191810   234   V: 9172617-9172850 Caenorhabditis elegans
Exon191811   104   V: 9172902-9173005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0222.9.1 9168393 9173005 -1

1 Sequence

Length
3829

1 Sequence Ontology Term

Identifier Name Description
transcript